Best Swirled Pumpkin Cream Cheese

Section: Sweet Treats for Any Occasion

Experience delicious warmth with swirled pumpkin cream cheese muffins, featuring a moist, spiced pumpkin base and a fluffy, tangy cream cheese filling. Pumpkin puree and brown sugar create tenderness, while homemade pumpkin spice blends with vanilla for rich autumn flavor. The creamy swirl adds sweetness and visual flair, making each bite irresistible. Perfect served warm or at room temperature, these crowd-pleasers are easy to prepare in just 30 minutes. Store them chilled or at room temperature for days of fresh enjoyment. Baking tips ensure a soft texture and gorgeous marbled appearance for your seasonal table.

woman cooking.
Created By Lena
Updated on Sat, 08 Nov 2025 15:31:30 GMT
A cupcake with a swirl of frosting. Save
A cupcake with a swirl of frosting. | recipesbylena.com

There is something irresistible about these swirled pumpkin cream cheese muffins soft pumpkin spiced muffins baked with pockets of tangy cream cheese. They are perfect for busy mornings cozy weekends or any time you want a treat bursting with autumn flavor. Mixing pumpkin and cream cheese will give you muffins with tender texture and pretty marbled tops the kind that always disappear first at brunch.

My family cannot get enough of these I made them for a bake sale years ago and now they are a Thanksgiving morning must bake. Everyone debates over who gets the muffin with the best swirl.

Ingredients

  • All purpose flour: gives structure to the muffins try to pick unbleached for best flavor
  • Pumpkin spice: brings cozy warmth use a fresh blend or make your own if needed
  • Baking soda: helps the muffins rise nice and tall check your box is fresh for best results
  • Salt: highlights the sweetness and balances flavor
  • Pumpkin puree: adds moisture and real pumpkin flavor choose a can with only pumpkin no fillers
  • Granulated sugar: sweetens the muffin and keeps the texture fine
  • Brown sugar: adds depth and keeps the crumb extra tender light or dark works
  • Large eggs: act as a binder and boost richness make sure they are at room temperature before mixing
  • Vegetable oil or melted butter: makes every bite moist and rich both work well so use what you prefer
  • Vanilla extract: adds mild warmth and aroma pure vanilla is worth it here
  • Cream cheese: gives the swirl a classic tang let it soften well for smooth mixing
  • Egg yolk: creates a creamy texture in the swirl at room temperature mixes in best

Instructions

Prepare the Muffin Tin:
Line a standard muffin pan with paper baking cups so the muffins release easily after baking
Mix the Dry Ingredients:
In a medium bowl whisk together the flour pumpkin spice baking soda and salt for even distribution and no clumps
Whisk Wet Ingredients:
In a large bowl stir together pumpkin granulated sugar and brown sugar until smooth beat in eggs oil and vanilla to combine
Combine the Mixtures:
Slowly add the dry ingredients into the wet mixture stirring just until everything comes together and no pockets of flour remain do not overmix here to keep the muffins tender
Fill the Muffin Cups:
Spoon the batter into prepared muffin tins filling each about three quarters full so there is room for the cream cheese swirl
Make the Cream Cheese Swirl:
In a medium bowl beat room temperature cream cheese until completely smooth add granulated sugar egg yolk and vanilla mix until creamy and lump free
Add and Swirl the Cream Cheese Topping:
Spoon about one tablespoon of the cream cheese mixture over each muffin Using a toothpick or skewer lightly swirl the topping into the batter for a marbled effect The swirls will not look perfect right now but they will bake up gorgeous
Bake:
Bake in a preheated oven at three hundred seventy five degrees Fahrenheit for eighteen to twenty minutes muffins are ready when a toothpick inserted in the pumpkin part comes out clean or with just a few moist crumbs attached
Cool and Enjoy:
Let the muffins cool in the pan for ten minutes this helps them set before moving them to a rack Eat warm or let them cool completely for the best cream cheese texture
A cupcake with a swirl of frosting on top.
A cupcake with a swirl of frosting on top. | recipesbylena.com

The pumpkin puree is what makes these extra moist and naturally sweet not to mention the color is so inviting My youngest always says these muffins remind her of autumn leaves on our driveway the best compliment I could hope for

Storage Tips

Store pumpkin cream cheese swirl muffins in the refrigerator using an airtight container so the cream cheese stays fresh They keep for up to five days I recommend letting them sit at room temperature for a few minutes before serving so the texture softens

Ingredient Substitutions

No pumpkin spice Use regular ground cinnamon and a little nutmeg or ginger Mix cinnamon with just a touch of cloves for a custom blend You can also swap vegetable oil for melted butter if you like a richer muffin

Serving Suggestions

Serve these muffins warm with hot coffee for breakfast or as a part of a brunch spread They are perfect alone but also fantastic with a drizzle of maple syrup or a scoop of whipped cream for dessert

Cultural and Seasonal Notes

Pumpkin and cream cheese is a classic pairing in North American baking especially popular during the fall holiday season I have baked these for Halloween breakfast and even as a quick dessert for a cozy movie night with friends

Seasonal Adaptations

Make with homemade pumpkin puree when fresh pumpkins are in season Try swirling in a bit of apple butter along with the cream cheese Top with a sprinkle of toasted pecans or walnuts before baking for added crunch

Success Stories

More than one family member has hidden these muffins in the back of the fridge to keep them away from others Friends have texted asking for the recipe after trying one at my kitchen table That perfect bite with tangy cream cheese and spiced pumpkin wins everyone over

Freezer Meal Conversion

Freeze cooled muffins in a zip top bag for up to three months Thaw overnight in the refrigerator or reheat gently in the microwave They taste just as delicious after freezing and are easy to pack for lunches

A tray of cupcakes with frosting.
A tray of cupcakes with frosting. | recipesbylena.com

These muffins are a lesson I will keep forever do not be shy with pumpkin spice and let those swirls be perfectly imperfect

Recipe FAQs

→ How do I get a pretty swirl in the muffin batter?

Use a toothpick to gently swirl the cream cheese mixture into the pumpkin batter before baking. Don't overmix—the marbled look adds charm.

→ Can I make these muffins ahead of time?

Yes, store them in an airtight container in the refrigerator for up to 5 days. Bring to room temperature before enjoying for best flavor and texture.

→ What can I use if I don’t have pumpkin spice?

Mix cinnamon, ginger, cloves, nutmeg, and allspice in the suggested proportions to create a homemade blend for the muffins.

→ Is it possible to use butter instead of vegetable oil?

Melted and cooled butter can be used in place of vegetable oil for extra richness. The muffins may turn out a touch denser.

→ Can I bake this as a loaf instead of muffins?

Absolutely—simply pour the batter into a loaf pan and adjust baking time as needed. Enjoy the same swirled effect in sliceable form.

→ How can I make sure the muffins stay moist?

Avoid overmixing the batter, and don’t overbake. Use both brown and granulated sugar for tenderness and keep an eye on doneness with a toothpick.

Best Swirled Pumpkin Cream Cheese

Moist pumpkin muffins with a creamy swirl offer tender crumb and warm spice in every autumn-inspired bite.

Preparation Time
12 minutes
Time to Cook
18 minutes
Overall Time
30 minutes
Created By: Lena

Recipe Category: Desserts

Difficulty Level: Great for Beginners

Cuisine Style: American

Serving Size: 12 Portions (12 standard muffins)

Dietary Categories: Suitable for Vegetarians

Ingredients List

→ Muffin Batter

01 220 g all-purpose flour
02 1 tablespoon pumpkin spice
03 1 teaspoon baking soda
04 0.5 teaspoon fine salt
05 425 g pumpkin puree
06 200 g granulated sugar
07 110 g light brown sugar, packed
08 2 large eggs
09 120 ml vegetable oil or melted, cooled butter
10 1 tablespoon vanilla extract

→ Cream Cheese Swirl

11 225 g cream cheese, room temperature
12 50 g granulated sugar
13 1 large egg yolk, room temperature
14 2 teaspoons vanilla extract

How to Make It

Step 01

Preheat oven to 190°C. Line a muffin tin with paper baking cups and set aside.

Step 02

In a medium bowl, whisk flour, pumpkin spice, baking soda, and salt until thoroughly combined. Set aside.

Step 03

In a large bowl, whisk pumpkin puree, granulated sugar, and brown sugar until smooth. Beat in eggs, oil, and vanilla extract. Stir until fully incorporated.

Step 04

Gently fold the dry ingredients into the wet mixture, mixing just until no streaks of flour remain. Avoid over-mixing.

Step 05

Spoon muffin batter into the prepared muffin cups, filling each about three-quarters full.

Step 06

In a separate bowl, beat cream cheese until smooth. Add granulated sugar, egg yolk, and vanilla extract; continue beating until light and creamy.

Step 07

Add approximately 1 tablespoon of the cream cheese mixture on top of each muffin. Use a toothpick to create a swirl pattern through the batter.

Step 08

Bake for 18 to 20 minutes or until a toothpick inserted into the pumpkin portion emerges clean with a few moist crumbs attached.

Step 09

Allow muffins to cool in the tin for 10 minutes. Serve slightly warm or let cool completely before storing.

Extra Tips

  1. Store in an airtight container in the refrigerator for up to 5 days. Allow muffins to come to room temperature or slightly chill before serving for best texture.
  2. If pumpkin spice blend is unavailable, combine 4 teaspoons cinnamon, 2 teaspoons ginger, 1 teaspoon cloves, 0.5 teaspoon nutmeg, and 0.5 teaspoon allspice.
  3. Avoid over-mixing the batter to maintain a tender crumb.

Essential Tools

  • Muffin tin
  • Paper baking cups
  • Medium mixing bowl
  • Large mixing bowl
  • Whisk
  • Electric mixer or hand whisk for cream cheese
  • Toothpick
  • Measuring cups and spoons

Allergen Warnings

Double-check all ingredients for allergens and consult your doctor if you’re unsure.
  • Contains dairy (cream cheese), eggs, and gluten (wheat flour).

Nutritional Information (Per Serving)

This info is offered for general knowledge and isn’t meant as medical advice.
  • Calories Info: 241
  • Total Fat: 11 grams
  • Total Carbs: 32 grams
  • Proteins Content: 3 grams